SBML
An XML-based standard exchange format for describing biochemical reaction networks, including species, reactions, parameters and mathematical expressions. It supports interoperability among a variety of modeling and simulation tools.
Timeline (last 90 days)
Traditionally, building biological models requires mastering specialized modeling languages (such as SBML) or simulation tools (such as COPASI, VCell).
SBML is an XML-based standardized exchange format used to describe biochemical reaction networks, including species, reactions, parameters, and mathematical expressions.
SBML is maintained by the SBML community and is currently supported by hundreds of modeling and simulation tools, making it the de facto common language in the field of systems biology today.
SBML itself only describes model structure and mathematical relationships and does not directly include simulation algorithms; users typically also need to pair it with a dedicated solver.
All Facts (4)
Traditionally, building biological models requires mastering specialized modeling languages (such as SBML) or simulation tools (such as COPASI, VCell).
50%UnverifiedSBML is an XML-based standardized exchange format used to describe biochemical reaction networks, including species, reactions, parameters, and mathematical expressions.
50%UnverifiedSBML is maintained by the SBML community and is currently supported by hundreds of modeling and simulation tools, making it the de facto common language in the field of systems biology today.
50%UnverifiedSBML itself only describes model structure and mathematical relationships and does not directly include simulation algorithms; users typically also need to pair it with a dedicated solver.
50%